ST7612AA1, a thioacetate-ω(γ-lactam carboxamide) derivative selected from a novel generation of oral HDAC inhibitors

J Med Chem. 2014 Oct 23;57(20):8358-77. doi: 10.1021/jm5008209. Epub 2014 Oct 8.

Abstract

A systematic study of medicinal chemistry aimed at identifying a new generation of HDAC inhibitors, through the introduction of a thiol zinc-binding group (ZBG) and of an amide-lactam in the ω-position of the polyethylene chain of the vorinostat scaffold, allowed the selection of a new class of potent pan-HDAC inhibitors (pan-HDACis). Simple, highly versatile, and efficient synthetic approaches were used to synthesize a library of these new derivatives, which were then submitted to a screening for HDAC inhibition as well as to a preliminary in vitro assessment of their antiproliferative activity. Molecular docking into HDAC crystal structures suggested a binding mode for these thiol derivatives consistent with the stereoselectivity observed upon insertion of amide-lactam substituents in the ω-position. ST7612AA1 (117), selected as a drug candidate for further development, showed an in vitro activity in the nanomolar range associated with a remarkable in vivo antitumor activity, highly competitive with the most potent HDAC inhibitors, currently under clinical trials. A preliminary study of PK and metabolism is also illustrated.

MeSH terms

  • Administration, Oral
  • Anilides / administration & dosage
  • Anilides / pharmacology*
  • Animals
  • Antineoplastic Agents / pharmacology
  • Chemistry Techniques, Synthetic
  • Drug Screening Assays, Antitumor
  • Female
  • HCT116 Cells
  • Histone Deacetylase Inhibitors / administration & dosage
  • Histone Deacetylase Inhibitors / chemical synthesis
  • Histone Deacetylase Inhibitors / chemistry*
  • Histone Deacetylase Inhibitors / pharmacology*
  • Histone Deacetylases / chemistry
  • Histones / metabolism
  • Humans
  • Mice, Nude
  • Molecular Docking Simulation
  • Pyrrolidinones / administration & dosage
  • Pyrrolidinones / pharmacology*
  • Repressor Proteins / chemistry
  • Tubulin / metabolism
  • Xenograft Model Antitumor Assays

Substances

  • Anilides
  • Antineoplastic Agents
  • Histone Deacetylase Inhibitors
  • Histones
  • Pyrrolidinones
  • Repressor Proteins
  • Tubulin
  • thioacetic acid S-(6-((5-oxopyrrolidine-2-carbonyl)amino)-6-phenylcarbamoylhexyl) ester
  • HDAC8 protein, human
  • Histone Deacetylases
  • histone deacetylase 3